Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MIR3621-201ENST00000580529 85 ntBASIC17.39■□□□□ 0.37
CGB1A6NKQ9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 CA15P2-201ENST00000611168 834 ntBASIC17.39■□□□□ 0.37
CGB1A6NKQ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CGB1A6NKQ9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.38■□□□□ 0.37
CGB1A6NKQ9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 AC241377.3-202ENST00000626088 1088 ntBASIC17.38■□□□□ 0.37
CGB1A6NKQ9 AC241585.3-202ENST00000628937 1088 ntBASIC17.38■□□□□ 0.37
CGB1A6NKQ9 AC245100.8-202ENST00000629247 1058 ntBASIC17.38■□□□□ 0.37
CGB1A6NKQ9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CGB1A6NKQ9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CGB1A6NKQ9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 AL356740.2-201ENST00000601559 647 ntBASIC17.36■□□□□ 0.37
CGB1A6NKQ9 AC099791.2-201ENST00000605725 427 ntBASIC17.36■□□□□ 0.37
CGB1A6NKQ9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CGB1A6NKQ9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 AL512631.2-201ENST00000604634 923 ntBASIC17.35■□□□□ 0.37
CGB1A6NKQ9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CGB1A6NKQ9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 pRNA.6-201ENST00000610482 90 ntBASIC17.34■□□□□ 0.37
CGB1A6NKQ9 pRNA.5-201ENST00000612139 90 ntBASIC17.34■□□□□ 0.37
CGB1A6NKQ9 pRNA.11-201ENST00000618423 90 ntBASIC17.34■□□□□ 0.37
CGB1A6NKQ9 pRNA.13-201ENST00000619112 90 ntBASIC17.34■□□□□ 0.37
CGB1A6NKQ9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 AC133637.1-201ENST00000624115 1537 ntBASIC17.34■□□□□ 0.37
CGB1A6NKQ9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CGB1A6NKQ9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CGB1A6NKQ9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CGB1A6NKQ9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CGB1A6NKQ9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.33■□□□□ 0.37
CGB1A6NKQ9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CGB1A6NKQ9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms