Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV25A0A0B4J276 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV25A0A0B4J276 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV25A0A0B4J276 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV25A0A0B4J276 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRAV25A0A0B4J276 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 AC012414.1-201ENST00000556676 535 ntBASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRAV25A0A0B4J276 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV25A0A0B4J276 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 AC087742.1-201ENST00000575880 1738 ntBASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV25A0A0B4J276 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 AL034346.1-201ENST00000568244 1277 ntBASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV25A0A0B4J276 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 OR7E47P-201ENST00000546390 1422 ntBASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 AC127496.7-201ENST00000625110 1798 ntBASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 AC027612.3-201ENST00000413684 1047 ntBASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 SMUG1P1-201ENST00000590640 811 ntBASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV25A0A0B4J276 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV25A0A0B4J276 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms