Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 AC090510.3-201ENST00000615831 821 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 MME-218ENST00000625667 363 ntTSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 LAMP5-201ENST00000246070 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 FAM107A-204ENST00000464064 2159 ntTSL 2 BASIC13.21□□□□□ -0.3
SLC1A1P43005 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 AC092117.2-201ENST00000623937 1659 ntBASIC13.21□□□□□ -0.3
SLC1A1P43005 CASS4-201ENST00000360314 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SLC1A1P43005 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.21□□□□□ -0.3
SLC1A1P43005 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC13.21□□□□□ -0.3
SLC1A1P43005 FAM90A21P-201ENST00000510875 1396 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A15P-201ENST00000514465 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A16P-201ENST00000526662 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A9P-201ENST00000527940 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A5P-201ENST00000528738 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A14P-201ENST00000530386 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM90A13P-201ENST00000534703 1395 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 BAHD1-202ENST00000560846 4432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SLC1A1P43005 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 ATP2C2-202ENST00000416219 3472 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 AC112176.1-201ENST00000565428 3024 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 MIR632-201ENST00000385193 94 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 KANK1P1-201ENST00000400619 1234 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 NOS2P3-201ENST00000411468 867 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 NOS2P2-201ENST00000426269 867 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.2□□□□□ -0.3
SLC1A1P43005 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 RN7SL396P-201ENST00000471086 295 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC13.2□□□□□ -0.3
SLC1A1P43005 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.2□□□□□ -0.3
SLC1A1P43005 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 MIR3610-201ENST00000582903 73 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 AC245884.9-201ENST00000596631 483 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 SPCS2P2-201ENST00000603270 608 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 AC130456.7-201ENST00000623838 1256 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 AC003991.1-211ENST00000631117 870 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 AC025278.3-201ENST00000636139 796 ntBASIC13.2□□□□□ -0.3
SLC1A1P43005 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SLC1A1P43005 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC13.2□□□□□ -0.3
SLC1A1P43005 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 THAP1-201ENST00000254250 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 ADGRE3-203ENST00000443157 1971 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC1A1P43005 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC1A1P43005 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 PPP1R26P5-201ENST00000416640 3664 ntBASIC13.19□□□□□ -0.3
SLC1A1P43005 AC092159.2-201ENST00000445418 1943 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC13.19□□□□□ -0.3
SLC1A1P43005 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 SEPT3-202ENST00000396425 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SLC1A1P43005 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 PGC-204ENST00000425343 1152 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC1A1P43005 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC1A1P43005 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms