Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
MTHFRP42898 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 REXO1L1P-201ENST00000379010 6598 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
MTHFRP42898 AC009237.11-201ENST00000425635 265 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 AC018892.1-201ENST00000451098 265 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 RN7SL43P-201ENST00000463926 291 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 RN7SL756P-201ENST00000488739 268 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC13.26□□□□□ -0.29
MTHFRP42898 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC13.26□□□□□ -0.29
MTHFRP42898 RAD52-212ENST00000541619 560 ntTSL 4 BASIC13.26□□□□□ -0.29
MTHFRP42898 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 AC126471.1-201ENST00000550676 362 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 AC100774.1-201ENST00000565581 1603 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 AC021683.4-201ENST00000623348 1099 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC13.26□□□□□ -0.29
MTHFRP42898 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
MTHFRP42898 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 AC027369.3-201ENST00000530465 3707 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
MTHFRP42898 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 AL021155.1-201ENST00000438808 2637 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC13.26□□□□□ -0.29
MTHFRP42898 PTPRVP-205ENST00000641549 5067 ntBASIC13.26□□□□□ -0.29
MTHFRP42898 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 AC007614.4-201ENST00000564048 1827 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 OR2I1P-208ENST00000641137 4948 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MTHFRP42898 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC079944.2-201ENST00000478867 734 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC233724.7-201ENST00000511476 253 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC093367.1-201ENST00000517332 420 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC13.25□□□□□ -0.29
MTHFRP42898 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 NT5CP1-201ENST00000554092 509 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC13.25□□□□□ -0.29
MTHFRP42898 AL627230.7-201ENST00000613971 601 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 MIEF1-215ENST00000637854 213 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms