Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 AC080038.3-201ENST00000623346 1952 ntBASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AP4B1Q9Y6B7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
AP4B1Q9Y6B7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 TSPY9P-201ENST00000440215 945 ntBASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 TSPY11P-201ENST00000442607 1045 ntBASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
AP4B1Q9Y6B7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 AC005229.4-201ENST00000610085 2198 ntBASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.83■□□□□ 0.92
AP4B1Q9Y6B7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 FAM99A-202ENST00000538190 1989 ntBASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP4B1Q9Y6B7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 UNC93B8-201ENST00000511903 705 ntBASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 SNX5-217ENST00000606557 1087 ntBASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.81■□□□□ 0.92
AP4B1Q9Y6B7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 AC004448.1-201ENST00000458332 883 ntBASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 MTDHP2-201ENST00000601468 714 ntBASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP4B1Q9Y6B7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
AP4B1Q9Y6B7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms