Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 AC133637.1-201ENST00000624115 1537 ntBASIC24.98■■□□□ 1.59
CLIC4Q9Y696 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLIC4Q9Y696 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.97■■□□□ 1.59
CLIC4Q9Y696 FBXW4P1-201ENST00000426721 2239 ntBASIC24.97■■□□□ 1.59
CLIC4Q9Y696 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 AL356441.2-201ENST00000443009 864 ntBASIC24.96■■□□□ 1.59
CLIC4Q9Y696 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLIC4Q9Y696 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.95■■□□□ 1.59
CLIC4Q9Y696 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
CLIC4Q9Y696 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLIC4Q9Y696 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 MIR3181-201ENST00000578512 73 ntBASIC24.93■■□□□ 1.58
CLIC4Q9Y696 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
CLIC4Q9Y696 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLIC4Q9Y696 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 AL031602.1-201ENST00000633169 911 ntBASIC24.91■■□□□ 1.58
CLIC4Q9Y696 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.91■■□□□ 1.58
CLIC4Q9Y696 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.9■■□□□ 1.58
CLIC4Q9Y696 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CLIC4Q9Y696 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 MIR4466-201ENST00000606121 54 ntBASIC24.89■■□□□ 1.58
CLIC4Q9Y696 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
CLIC4Q9Y696 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.89■■□□□ 1.57
CLIC4Q9Y696 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms