Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 MFSD11-216ENST00000590393 1141 ntBASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.07■■□□□ 1.28
HCFC2Q9Y5Z7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HCFC2Q9Y5Z7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HCFC2Q9Y5Z7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC2Q9Y5Z7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 CD99P1-205ENST00000527459 561 ntBASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 AC142086.2-201ENST00000569753 217 ntBASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 AL050303.2-201ENST00000619798 666 ntBASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 TMEM191A-211ENST00000637163 1067 ntBASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 AC004812.2-201ENST00000611079 2094 ntBASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HCFC2Q9Y5Z7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.02■■□□□ 1.28
HCFC2Q9Y5Z7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 AC104187.1-201ENST00000607510 612 ntBASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
HCFC2Q9Y5Z7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 AL121832.2-201ENST00000610979 668 ntBASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 LINC01124-201ENST00000409786 2117 ntBASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 AC005224.4-201ENST00000583262 1652 ntBASIC23■■□□□ 1.27
HCFC2Q9Y5Z7 KRT87P-202ENST00000534226 1464 ntBASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.99■■□□□ 1.27
HCFC2Q9Y5Z7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 AC083906.2-201ENST00000511578 360 ntBASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 LINC00543-201ENST00000567234 1845 ntBASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.98■■□□□ 1.27
HCFC2Q9Y5Z7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.97■■□□□ 1.27
HCFC2Q9Y5Z7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms