Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC006970.2-201ENST00000450065 779 ntBASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 KRT87P-202ENST00000534226 1464 ntBASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCN10AQ9Y5Y9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 AC079140.4-201ENST00000507448 529 ntBASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.23■■□□□ 1.47
SCN10AQ9Y5Y9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 AL355802.2-201ENST00000402069 882 ntBASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 AL050303.2-201ENST00000619798 666 ntBASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SCN10AQ9Y5Y9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 ESRRAP2-201ENST00000418437 1549 ntBASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 DUSP8P3-201ENST00000399571 1760 ntBASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 ABHD17AP1-201ENST00000358206 933 ntBASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 AC104187.1-201ENST00000607510 612 ntBASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 OXCT2P1-201ENST00000447263 1535 ntBASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCN10AQ9Y5Y9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SCN10AQ9Y5Y9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 AL109923.1-201ENST00000618799 583 ntBASIC24.2■■□□□ 1.46
SCN10AQ9Y5Y9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 AC011767.1-201ENST00000617410 1153 ntBASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SCN10AQ9Y5Y9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 DUX4L16-201ENST00000555130 1264 ntBASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.18■■□□□ 1.46
SCN10AQ9Y5Y9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SCN10AQ9Y5Y9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 UBE2DNL-204ENST00000602536 740 ntBASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 AC009237.3-201ENST00000393279 1427 ntBASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SCN10AQ9Y5Y9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 AC142086.2-201ENST00000569753 217 ntBASIC24.15■■□□□ 1.46
SCN10AQ9Y5Y9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms