Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA11Q9Y5H2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHGA11Q9Y5H2 AC133637.1-201ENST00000624115 1537 ntBASIC21.13■□□□□ 0.97
PCDHGA11Q9Y5H2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 AL024507.2-201ENST00000606070 2574 ntBASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGA11Q9Y5H2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA11Q9Y5H2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA11Q9Y5H2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 MIR3181-201ENST00000578512 73 ntBASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA11Q9Y5H2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 DUX4L19-201ENST00000557448 1267 ntBASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 MIR4466-201ENST00000606121 54 ntBASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA11Q9Y5H2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA11Q9Y5H2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 AC080038.3-201ENST00000623346 1952 ntBASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA11Q9Y5H2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms