Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
FNDC3AQ9Y2H6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.2■■□□□ 1.15
FNDC3AQ9Y2H6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
FNDC3AQ9Y2H6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.2■■□□□ 1.14
FNDC3AQ9Y2H6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L2-201ENST00000561772 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L4-201ENST00000566884 1269 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 AL137784.2-201ENST00000607332 1000 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L6-201ENST00000626483 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L1-201ENST00000627662 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L8-201ENST00000629013 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L3-201ENST00000630187 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L7-201ENST00000630678 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 DUX4L5-201ENST00000630834 1275 ntBASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3AQ9Y2H6 AC133561.1-201ENST00000568600 2415 ntBASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 SLC47A1P1-202ENST00000449666 945 ntBASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 AC092437.1-201ENST00000624794 1048 ntBASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3AQ9Y2H6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 AC004687.1-201ENST00000579003 1625 ntBASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.17■■□□□ 1.14
FNDC3AQ9Y2H6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FNDC3AQ9Y2H6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 PKD1P6-201ENST00000343738 4769 ntBASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.15■■□□□ 1.14
FNDC3AQ9Y2H6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.14■■□□□ 1.14
FNDC3AQ9Y2H6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
FNDC3AQ9Y2H6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.14■■□□□ 1.14
FNDC3AQ9Y2H6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
FNDC3AQ9Y2H6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FNDC3AQ9Y2H6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
FNDC3AQ9Y2H6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FNDC3AQ9Y2H6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.14■■□□□ 1.13
FNDC3AQ9Y2H6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms