Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.78■■□□□ 1.08
NCDNQ9UBB6 AC105036.2-201ENST00000569468 176 ntBASIC21.78■■□□□ 1.08
NCDNQ9UBB6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCDNQ9UBB6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 AC098934.4-201ENST00000564127 592 ntBASIC21.77■■□□□ 1.08
NCDNQ9UBB6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCDNQ9UBB6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NCDNQ9UBB6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NCDNQ9UBB6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCDNQ9UBB6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
NCDNQ9UBB6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 AC104187.1-201ENST00000607510 612 ntBASIC21.74■■□□□ 1.07
NCDNQ9UBB6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.74■■□□□ 1.07
NCDNQ9UBB6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 MIR4758-201ENST00000577688 71 ntBASIC21.73■■□□□ 1.07
NCDNQ9UBB6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 UBE2DNL-204ENST00000602536 740 ntBASIC21.73■■□□□ 1.07
NCDNQ9UBB6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCDNQ9UBB6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 LINC01529-204ENST00000636474 1715 ntBASIC21.72■■□□□ 1.07
NCDNQ9UBB6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCDNQ9UBB6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 SMUG1P1-201ENST00000590640 811 ntBASIC21.71■■□□□ 1.07
NCDNQ9UBB6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NCDNQ9UBB6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 DUSP5P2-201ENST00000426873 1033 ntBASIC21.7■■□□□ 1.06
NCDNQ9UBB6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCDNQ9UBB6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms