Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DUX4L16-201ENST00000555130 1264 ntBASIC31.7■■■□□ 2.67
SLC52A1Q9NWF4 AC104187.1-201ENST00000607510 612 ntBASIC31.7■■■□□ 2.67
SLC52A1Q9NWF4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SLC52A1Q9NWF4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SLC52A1Q9NWF4 AC009237.3-201ENST00000393279 1427 ntBASIC31.69■■■□□ 2.66
SLC52A1Q9NWF4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.69■■■□□ 2.66
SLC52A1Q9NWF4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.69■■■□□ 2.66
SLC52A1Q9NWF4 LINC00543-201ENST00000567234 1845 ntBASIC31.69■■■□□ 2.66
SLC52A1Q9NWF4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SLC52A1Q9NWF4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 GUSBP6-202ENST00000438529 1198 ntBASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 AC083906.2-201ENST00000511578 360 ntBASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SLC52A1Q9NWF4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 SLC7A5P2-201ENST00000553010 536 ntBASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.67■■■□□ 2.66
SLC52A1Q9NWF4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.66■■■□□ 2.66
SLC52A1Q9NWF4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SLC52A1Q9NWF4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SLC52A1Q9NWF4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.65■■■□□ 2.66
SLC52A1Q9NWF4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.65■■■□□ 2.66
SLC52A1Q9NWF4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.65■■■□□ 2.66
SLC52A1Q9NWF4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SLC52A1Q9NWF4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
SLC52A1Q9NWF4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
SLC52A1Q9NWF4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.63■■■□□ 2.65
SLC52A1Q9NWF4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 DUSP8P3-201ENST00000399571 1760 ntBASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SLC52A1Q9NWF4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 AC007322.1-201ENST00000426983 750 ntBASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLC52A1Q9NWF4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 KRT18P6-201ENST00000555540 1265 ntBASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 UBE2DNL-204ENST00000602536 740 ntBASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 AC005181.1-201ENST00000604782 1256 ntBASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.6■■■□□ 2.65
SLC52A1Q9NWF4 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 AL139125.2-201ENST00000623134 1869 ntBASIC31.59■■■□□ 2.65
SLC52A1Q9NWF4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms