Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.29■□□□□ 0.84
RLIMQ9NVW2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RLIMQ9NVW2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
RLIMQ9NVW2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
RLIMQ9NVW2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RLIMQ9NVW2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RLIMQ9NVW2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.27■□□□□ 0.83
RLIMQ9NVW2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RLIMQ9NVW2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
RLIMQ9NVW2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RLIMQ9NVW2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 AC026310.3-201ENST00000625186 2373 ntBASIC20.24■□□□□ 0.83
RLIMQ9NVW2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 MIR3621-201ENST00000580529 85 ntBASIC20.24■□□□□ 0.83
RLIMQ9NVW2 AL356740.2-201ENST00000601559 647 ntBASIC20.24■□□□□ 0.83
RLIMQ9NVW2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.24■□□□□ 0.83
RLIMQ9NVW2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RLIMQ9NVW2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms