Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 AC244015.2-201ENST00000616358 1861 ntBASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMCO4Q9NRQ5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMCO4Q9NRQ5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 AL161729.1-201ENST00000604104 1402 ntBASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMCO4Q9NRQ5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMCO4Q9NRQ5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SMCO4Q9NRQ5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 AL359504.2-201ENST00000605506 1601 ntBASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 AC026471.1-201ENST00000564629 3026 ntBASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMCO4Q9NRQ5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMCO4Q9NRQ5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SMCO4Q9NRQ5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO4Q9NRQ5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms