Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 TSPY26P-201ENST00000476365 1326 ntBASIC20.42■□□□□ 0.86
KLHL1Q9NR64 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KLHL1Q9NR64 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 AC087623.3-201ENST00000607047 1098 ntBASIC20.41■□□□□ 0.86
KLHL1Q9NR64 MIR6821-201ENST00000617625 74 ntBASIC20.41■□□□□ 0.86
KLHL1Q9NR64 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.41■□□□□ 0.86
KLHL1Q9NR64 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KLHL1Q9NR64 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 AC097381.1-201ENST00000429019 1296 ntBASIC20.4■□□□□ 0.86
KLHL1Q9NR64 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 FP325331.1-202ENST00000623531 1380 ntBASIC20.4■□□□□ 0.86
KLHL1Q9NR64 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
KLHL1Q9NR64 CLDN5-201ENST00000403084 2357 ntBASIC20.39■□□□□ 0.86
KLHL1Q9NR64 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.39■□□□□ 0.86
KLHL1Q9NR64 AC092068.2-201ENST00000590491 1708 ntBASIC20.39■□□□□ 0.86
KLHL1Q9NR64 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KLHL1Q9NR64 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.39■□□□□ 0.86
KLHL1Q9NR64 AC144652.1-201ENST00000609974 1624 ntBASIC20.39■□□□□ 0.86
KLHL1Q9NR64 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KLHL1Q9NR64 LINC01529-204ENST00000636474 1715 ntBASIC20.39■□□□□ 0.85
KLHL1Q9NR64 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 DUX4L4-201ENST00000566884 1269 ntBASIC20.38■□□□□ 0.85
KLHL1Q9NR64 AL499627.2-201ENST00000606283 725 ntBASIC20.38■□□□□ 0.85
KLHL1Q9NR64 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KLHL1Q9NR64 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 AC010525.1-201ENST00000585559 441 ntBASIC20.37■□□□□ 0.85
KLHL1Q9NR64 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.37■□□□□ 0.85
KLHL1Q9NR64 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms