Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RETREG1Q9H6L5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RETREG1Q9H6L5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RETREG1Q9H6L5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RETREG1Q9H6L5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 AC105233.4-201ENST00000642045 216 ntBASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.29■■□□□ 1.16
RETREG1Q9H6L5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 ZNRF2P3-201ENST00000424200 374 ntBASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 SMUG1P1-201ENST00000590640 811 ntBASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RETREG1Q9H6L5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 AC012676.1-201ENST00000574705 1949 ntBASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETREG1Q9H6L5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.27■■□□□ 1.15
RETREG1Q9H6L5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 AL034346.1-201ENST00000568244 1277 ntBASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 C1orf229-201ENST00000623686 2258 ntBASIC22.26■■□□□ 1.15
RETREG1Q9H6L5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 OR7E47P-201ENST00000546390 1422 ntBASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 AC027612.3-201ENST00000413684 1047 ntBASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 AC068473.5-201ENST00000616428 2072 ntBASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETREG1Q9H6L5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETREG1Q9H6L5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 LINC00526-201ENST00000581067 1875 ntBASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.23■■□□□ 1.15
RETREG1Q9H6L5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 507.9 ms