Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
NDST4Q9H3R1 FBXW4P1-201ENST00000426721 2239 ntBASIC23.82■■□□□ 1.4
NDST4Q9H3R1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NDST4Q9H3R1 AC007375.3-201ENST00000600936 2314 ntBASIC23.81■■□□□ 1.4
NDST4Q9H3R1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 AC006455.2-201ENST00000429931 906 ntBASIC23.8■■□□□ 1.4
NDST4Q9H3R1 AL356740.2-201ENST00000601559 647 ntBASIC23.8■■□□□ 1.4
NDST4Q9H3R1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NDST4Q9H3R1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 MIR3621-201ENST00000580529 85 ntBASIC23.79■■□□□ 1.4
NDST4Q9H3R1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NDST4Q9H3R1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 AC133637.1-201ENST00000624115 1537 ntBASIC23.78■■□□□ 1.4
NDST4Q9H3R1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDST4Q9H3R1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 AC099791.2-201ENST00000605725 427 ntBASIC23.77■■□□□ 1.4
NDST4Q9H3R1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.77■■□□□ 1.4
NDST4Q9H3R1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
NDST4Q9H3R1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.76■■□□□ 1.39
NDST4Q9H3R1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 pRNA.6-201ENST00000610482 90 ntBASIC23.76■■□□□ 1.39
NDST4Q9H3R1 pRNA.5-201ENST00000612139 90 ntBASIC23.76■■□□□ 1.39
NDST4Q9H3R1 pRNA.11-201ENST00000618423 90 ntBASIC23.76■■□□□ 1.39
NDST4Q9H3R1 pRNA.13-201ENST00000619112 90 ntBASIC23.76■■□□□ 1.39
NDST4Q9H3R1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
NDST4Q9H3R1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.75■■□□□ 1.39
NDST4Q9H3R1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 AL031602.1-201ENST00000633169 911 ntBASIC23.74■■□□□ 1.39
NDST4Q9H3R1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NDST4Q9H3R1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NDST4Q9H3R1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NDST4Q9H3R1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NDST4Q9H3R1 AC010542.4-201ENST00000563151 1910 ntBASIC23.73■■□□□ 1.39
NDST4Q9H3R1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NDST4Q9H3R1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NDST4Q9H3R1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms