Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MS4A6AQ9H2W1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 AC131281.2-201ENST00000520478 145 ntBASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 AC099791.2-201ENST00000605725 427 ntBASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MS4A6AQ9H2W1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 MIR4466-201ENST00000606121 54 ntBASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MS4A6AQ9H2W1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.71■□□□□ 0.26
MS4A6AQ9H2W1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 AC092171.4-201ENST00000609130 632 ntBASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A6AQ9H2W1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MS4A6AQ9H2W1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 AC006455.2-201ENST00000429931 906 ntBASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A6AQ9H2W1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MS4A6AQ9H2W1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A6AQ9H2W1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
MS4A6AQ9H2W1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A6AQ9H2W1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms