Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.23■□□□□ 0.67
COMMD4Q9H0A8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COMMD4Q9H0A8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD4Q9H0A8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
COMMD4Q9H0A8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AC103724.3-201ENST00000564481 992 ntBASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 DUX4L4-201ENST00000566884 1269 ntBASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD4Q9H0A8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 AC103834.1-201ENST00000520383 144 ntBASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD4Q9H0A8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 KRT8P33-201ENST00000508125 1423 ntBASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD4Q9H0A8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms