Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
ABCA3Q99758 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA3Q99758 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA3Q99758 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA3Q99758 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ABCA3Q99758 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
ABCA3Q99758 AP003733.4-201ENST00000623785 1697 ntBASIC29.59■■■□□ 2.33
ABCA3Q99758 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.59■■■□□ 2.33
ABCA3Q99758 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ABCA3Q99758 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.59■■■□□ 2.33
ABCA3Q99758 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ABCA3Q99758 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ABCA3Q99758 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA3Q99758 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.58■■■□□ 2.33
ABCA3Q99758 SLC7A5P1-201ENST00000568957 537 ntBASIC29.58■■■□□ 2.33
ABCA3Q99758 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC29.58■■■□□ 2.33
ABCA3Q99758 PFKL-212ENST00000628044 129 ntTSL 3 BASIC29.58■■■□□ 2.33
ABCA3Q99758 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA3Q99758 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA3Q99758 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ABCA3Q99758 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA3Q99758 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
ABCA3Q99758 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
ABCA3Q99758 FAM201B-201ENST00000458407 597 ntBASIC29.57■■■□□ 2.32
ABCA3Q99758 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ABCA3Q99758 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC29.57■■■□□ 2.32
ABCA3Q99758 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA3Q99758 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA3Q99758 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA3Q99758 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA3Q99758 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC29.56■■■□□ 2.32
ABCA3Q99758 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.56■■■□□ 2.32
ABCA3Q99758 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.56■■■□□ 2.32
ABCA3Q99758 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.56■■■□□ 2.32
ABCA3Q99758 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
ABCA3Q99758 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ABCA3Q99758 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA3Q99758 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
ABCA3Q99758 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
ABCA3Q99758 AC133552.2-202ENST00000575694 574 ntBASIC29.55■■■□□ 2.32
ABCA3Q99758 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC29.55■■■□□ 2.32
ABCA3Q99758 MARS-234ENST00000630571 216 ntTSL 5 BASIC29.55■■■□□ 2.32
ABCA3Q99758 MARS-235ENST00000630803 183 ntTSL 3 BASIC29.55■■■□□ 2.32
ABCA3Q99758 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.54■■■□□ 2.32
ABCA3Q99758 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC29.54■■■□□ 2.32
ABCA3Q99758 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.54■■■□□ 2.32
ABCA3Q99758 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.54■■■□□ 2.32
ABCA3Q99758 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ABCA3Q99758 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.54■■■□□ 2.32
ABCA3Q99758 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
ABCA3Q99758 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.53■■■□□ 2.32
ABCA3Q99758 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA3Q99758 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.53■■■□□ 2.32
ABCA3Q99758 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA3Q99758 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA3Q99758 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC29.53■■■□□ 2.32
ABCA3Q99758 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC29.53■■■□□ 2.32
ABCA3Q99758 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ABCA3Q99758 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29.53■■■□□ 2.32
ABCA3Q99758 AC135731.1-201ENST00000569415 2548 ntBASIC29.53■■■□□ 2.32
ABCA3Q99758 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
ABCA3Q99758 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA3Q99758 PRORSD1P-201ENST00000295112 541 ntBASIC29.52■■■□□ 2.32
ABCA3Q99758 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC29.52■■■□□ 2.32
ABCA3Q99758 RNA5SP413-201ENST00000516373 109 ntBASIC29.52■■■□□ 2.32
ABCA3Q99758 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC29.52■■■□□ 2.32
ABCA3Q99758 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC29.52■■■□□ 2.32
ABCA3Q99758 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC29.52■■■□□ 2.32
ABCA3Q99758 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA3Q99758 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ABCA3Q99758 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.51■■■□□ 2.32
ABCA3Q99758 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.51■■■□□ 2.31
ABCA3Q99758 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.51■■■□□ 2.31
ABCA3Q99758 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA3Q99758 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA3Q99758 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA3Q99758 RARRES2P4-201ENST00000514074 484 ntBASIC29.51■■■□□ 2.31
ABCA3Q99758 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
ABCA3Q99758 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ABCA3Q99758 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC29.5■■■□□ 2.31
ABCA3Q99758 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
ABCA3Q99758 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 AC133041.1-202ENST00000642053 222 ntBASIC29.5■■■□□ 2.31
ABCA3Q99758 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ABCA3Q99758 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms