Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 SMUG1P1-201ENST00000590640 811 ntBASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.69■■□□□ 1.22
CDK5RAP1Q96SZ6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.68■■□□□ 1.22
CDK5RAP1Q96SZ6 BX005040.4-201ENST00000637145 1518 ntBASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 AC034268.1-201ENST00000441047 882 ntBASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CDK5RAP1Q96SZ6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 AC079089.2-201ENST00000531211 1277 ntBASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDK5RAP1Q96SZ6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDK5RAP1Q96SZ6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CDK5RAP1Q96SZ6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CDK5RAP1Q96SZ6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CDK5RAP1Q96SZ6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDK5RAP1Q96SZ6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 TERF1P2-201ENST00000583350 1212 ntBASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDK5RAP1Q96SZ6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms