Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF48Q96MX3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF48Q96MX3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ZNF48Q96MX3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF48Q96MX3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 AC092068.2-201ENST00000590491 1708 ntBASIC17.76■□□□□ 0.43
ZNF48Q96MX3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF48Q96MX3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.75■□□□□ 0.43
ZNF48Q96MX3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC004687.1-201ENST00000579003 1625 ntBASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF48Q96MX3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 KRT18P61-201ENST00000585825 1298 ntBASIC17.74■□□□□ 0.43
ZNF48Q96MX3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF48Q96MX3 AC068473.5-201ENST00000616428 2072 ntBASIC17.73■□□□□ 0.43
ZNF48Q96MX3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF48Q96MX3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 ANOS2P-203ENST00000472227 1816 ntBASIC17.72■□□□□ 0.43
ZNF48Q96MX3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ZNF48Q96MX3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms