Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 AC009086.3-201ENST00000623486 1008 ntBASIC18.77■□□□□ 0.6
CMTM3Q96MX0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CMTM3Q96MX0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CMTM3Q96MX0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CMTM3Q96MX0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CMTM3Q96MX0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 DUX4L9-201ENST00000449051 1259 ntBASIC18.75■□□□□ 0.59
CMTM3Q96MX0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMTM3Q96MX0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMTM3Q96MX0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMTM3Q96MX0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CMTM3Q96MX0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.71■□□□□ 0.59
CMTM3Q96MX0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CMTM3Q96MX0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.7■□□□□ 0.58
CMTM3Q96MX0 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms