Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.56■□□□□ 0.72
CPNE4Q96A23 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPNE4Q96A23 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CPNE4Q96A23 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE4Q96A23 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE4Q96A23 IRS3P-201ENST00000223076 1006 ntBASIC19.55■□□□□ 0.72
CPNE4Q96A23 ZNRF2P3-201ENST00000424200 374 ntBASIC19.55■□□□□ 0.72
CPNE4Q96A23 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE4Q96A23 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPNE4Q96A23 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CPNE4Q96A23 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE4Q96A23 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE4Q96A23 MIR572-201ENST00000384983 95 ntBASIC19.54■□□□□ 0.72
CPNE4Q96A23 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE4Q96A23 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CPNE4Q96A23 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE4Q96A23 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE4Q96A23 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE4Q96A23 OXCT2P1-201ENST00000447263 1535 ntBASIC19.52■□□□□ 0.72
CPNE4Q96A23 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE4Q96A23 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE4Q96A23 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE4Q96A23 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE4Q96A23 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CPNE4Q96A23 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPNE4Q96A23 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CPNE4Q96A23 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE4Q96A23 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE4Q96A23 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE4Q96A23 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE4Q96A23 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 CLDN5-201ENST00000403084 2357 ntBASIC19.5■□□□□ 0.71
CPNE4Q96A23 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE4Q96A23 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE4Q96A23 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CPNE4Q96A23 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE4Q96A23 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms