Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.09■□□□□ 0.81
CNOT9Q92600 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.09■□□□□ 0.81
CNOT9Q92600 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.09■□□□□ 0.81
CNOT9Q92600 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.09■□□□□ 0.81
CNOT9Q92600 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.09■□□□□ 0.81
CNOT9Q92600 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT9Q92600 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.09■□□□□ 0.81
CNOT9Q92600 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT9Q92600 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT9Q92600 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT9Q92600 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT9Q92600 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT9Q92600 AC137767.1-201ENST00000602918 1920 ntBASIC20.08■□□□□ 0.81
CNOT9Q92600 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.08■□□□□ 0.81
CNOT9Q92600 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT9Q92600 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CNOT9Q92600 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.08■□□□□ 0.81
CNOT9Q92600 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.08■□□□□ 0.81
CNOT9Q92600 AC092171.4-201ENST00000609130 632 ntBASIC20.08■□□□□ 0.81
CNOT9Q92600 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CNOT9Q92600 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT9Q92600 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.08■□□□□ 0.8
CNOT9Q92600 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CNOT9Q92600 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT9Q92600 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CNOT9Q92600 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 LINC00565-201ENST00000562710 2331 ntBASIC20.07■□□□□ 0.8
CNOT9Q92600 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT9Q92600 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT9Q92600 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT9Q92600 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CNOT9Q92600 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CNOT9Q92600 CA15P2-201ENST00000611168 834 ntBASIC20.06■□□□□ 0.8
CNOT9Q92600 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 AC092053.2-201ENST00000640557 1818 ntBASIC20.06■□□□□ 0.8
CNOT9Q92600 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.06■□□□□ 0.8
CNOT9Q92600 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNOT9Q92600 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT9Q92600 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNOT9Q92600 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT9Q92600 SERBP1P1-201ENST00000396021 1160 ntBASIC20.05■□□□□ 0.8
CNOT9Q92600 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.05■□□□□ 0.8
CNOT9Q92600 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT9Q92600 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.05■□□□□ 0.8
CNOT9Q92600 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 AC131212.1-201ENST00000613771 668 ntBASIC20.05■□□□□ 0.8
CNOT9Q92600 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
CNOT9Q92600 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNOT9Q92600 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNOT9Q92600 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.05■□□□□ 0.8
CNOT9Q92600 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNOT9Q92600 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT9Q92600 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CNOT9Q92600 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNOT9Q92600 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.04■□□□□ 0.8
CNOT9Q92600 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.04■□□□□ 0.8
CNOT9Q92600 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms