Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.53■□□□□ 0.88
TM9SF4Q92544 AC012414.1-201ENST00000556676 535 ntBASIC20.53■□□□□ 0.88
TM9SF4Q92544 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TM9SF4Q92544 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF4Q92544 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF4Q92544 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF4Q92544 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF4Q92544 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF4Q92544 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 OR2I1P-207ENST00000453522 948 ntBASIC20.52■□□□□ 0.88
TM9SF4Q92544 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF4Q92544 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF4Q92544 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.52■□□□□ 0.88
TM9SF4Q92544 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TM9SF4Q92544 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.52■□□□□ 0.87
TM9SF4Q92544 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.51■□□□□ 0.87
TM9SF4Q92544 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.51■□□□□ 0.87
TM9SF4Q92544 AC022517.1-201ENST00000592429 346 ntBASIC20.51■□□□□ 0.87
TM9SF4Q92544 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TM9SF4Q92544 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF4Q92544 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.51■□□□□ 0.87
TM9SF4Q92544 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 KRT18P5-201ENST00000436075 1291 ntBASIC20.5■□□□□ 0.87
TM9SF4Q92544 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF4Q92544 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF4Q92544 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 ANOS2P-203ENST00000472227 1816 ntBASIC20.49■□□□□ 0.87
TM9SF4Q92544 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 DUX4L4-201ENST00000566884 1269 ntBASIC20.49■□□□□ 0.87
TM9SF4Q92544 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF4Q92544 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF4Q92544 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF4Q92544 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TM9SF4Q92544 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF4Q92544 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF4Q92544 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF4Q92544 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF4Q92544 C1orf229-201ENST00000623686 2258 ntBASIC20.48■□□□□ 0.87
TM9SF4Q92544 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TM9SF4Q92544 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L2-201ENST00000561772 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L6-201ENST00000626483 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L1-201ENST00000627662 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L8-201ENST00000629013 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L3-201ENST00000630187 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L7-201ENST00000630678 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 DUX4L5-201ENST00000630834 1275 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 RARRES2P11-201ENST00000635158 484 ntBASIC20.47■□□□□ 0.87
TM9SF4Q92544 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF4Q92544 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TM9SF4Q92544 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM9SF4Q92544 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TM9SF4Q92544 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TM9SF4Q92544 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms