Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC33.89■■■■□ 3.02
CCNB3Q8WWL7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC33.89■■■■□ 3.02
CCNB3Q8WWL7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
CCNB3Q8WWL7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
CCNB3Q8WWL7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC33.89■■■■□ 3.02
CCNB3Q8WWL7 DUSP8P3-201ENST00000399571 1760 ntBASIC33.88■■■■□ 3.01
CCNB3Q8WWL7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC33.88■■■■□ 3.01
CCNB3Q8WWL7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC33.88■■■■□ 3.01
CCNB3Q8WWL7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CCNB3Q8WWL7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
CCNB3Q8WWL7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CCNB3Q8WWL7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CCNB3Q8WWL7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CCNB3Q8WWL7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CCNB3Q8WWL7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
CCNB3Q8WWL7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 SMUG1P1-201ENST00000590640 811 ntBASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 BX005040.4-201ENST00000637145 1518 ntBASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
CCNB3Q8WWL7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 AC004854.2-201ENST00000608450 1441 ntBASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 AP004607.4-201ENST00000530158 1459 ntBASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 RAP2CP1-201ENST00000605103 478 ntBASIC33.85■■■■□ 3.01
CCNB3Q8WWL7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 AC010141.3-201ENST00000456659 717 ntBASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC33.84■■■■□ 3.01
CCNB3Q8WWL7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 COX20-201ENST00000366528 568 ntTSL 2 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 DBI-210ENST00000542275 757 ntTSL 5 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 AC137761.2-201ENST00000561729 223 ntBASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 AC145350.3-201ENST00000569033 163 ntBASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CCNB3Q8WWL7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.82■■■■□ 3.01
CCNB3Q8WWL7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
CCNB3Q8WWL7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.82■■■■□ 3.01
CCNB3Q8WWL7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC33.82■■■■□ 3
CCNB3Q8WWL7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC33.82■■■■□ 3
CCNB3Q8WWL7 AC080038.1-201ENST00000611274 1154 ntBASIC33.82■■■■□ 3
CCNB3Q8WWL7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC33.82■■■■□ 3
CCNB3Q8WWL7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CCNB3Q8WWL7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CCNB3Q8WWL7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC33.82■■■■□ 3
CCNB3Q8WWL7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC33.81■■■■□ 3
CCNB3Q8WWL7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.81■■■■□ 3
CCNB3Q8WWL7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC33.81■■■■□ 3
CCNB3Q8WWL7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC33.81■■■■□ 3
CCNB3Q8WWL7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC33.81■■■■□ 3
CCNB3Q8WWL7 AC087239.1-201ENST00000622671 572 ntBASIC33.81■■■■□ 3
CCNB3Q8WWL7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC33.81■■■■□ 3
CCNB3Q8WWL7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CCNB3Q8WWL7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC33.8■■■■□ 3
CCNB3Q8WWL7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CCNB3Q8WWL7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
CCNB3Q8WWL7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
CCNB3Q8WWL7 AC016769.1-201ENST00000409132 1010 ntBASIC33.79■■■■□ 3
CCNB3Q8WWL7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC33.79■■■■□ 3
CCNB3Q8WWL7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
CCNB3Q8WWL7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC33.79■■■■□ 3
CCNB3Q8WWL7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC33.79■■■■□ 3
CCNB3Q8WWL7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC33.79■■■■□ 3
CCNB3Q8WWL7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms