Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AC120024.1-201ENST00000562672 995 ntBASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 AC005229.4-201ENST00000610085 2198 ntBASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRUB1Q8WWH5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRUB1Q8WWH5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 KRT18P24-201ENST00000344739 1156 ntBASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRUB1Q8WWH5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.94■□□□□ 0.78
TRUB1Q8WWH5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRUB1Q8WWH5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 AC010542.4-201ENST00000563151 1910 ntBASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 FAM99A-202ENST00000538190 1989 ntBASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.92■□□□□ 0.78
TRUB1Q8WWH5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 MIR4281-201ENST00000580852 62 ntBASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRUB1Q8WWH5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 AC139795.1-202ENST00000500444 432 ntBASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 THA1P-201ENST00000590384 1145 ntBASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 FP325331.1-202ENST00000623531 1380 ntBASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms