Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF4Q8WWF5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF4Q8WWF5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNRF4Q8WWF5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNRF4Q8WWF5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNRF4Q8WWF5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 CA15P2-201ENST00000611168 834 ntBASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNRF4Q8WWF5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 AL499627.2-201ENST00000606283 725 ntBASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 FAM99A-202ENST00000538190 1989 ntBASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNRF4Q8WWF5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 AC026310.3-201ENST00000625186 2373 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 MIR6724-1-201ENST00000616420 92 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 MIR6724-2-201ENST00000616483 92 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 MIR6724-4-201ENST00000617390 92 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 MIR6724-3-201ENST00000622482 92 ntBASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNRF4Q8WWF5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNRF4Q8WWF5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNRF4Q8WWF5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF4Q8WWF5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms