Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PCDH19Q8TAB3 LINC00565-201ENST00000562710 2331 ntBASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 DUX4L19-201ENST00000557448 1267 ntBASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH19Q8TAB3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
PCDH19Q8TAB3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDH19Q8TAB3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDH19Q8TAB3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 AC092053.2-201ENST00000640557 1818 ntBASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 OR2I1P-207ENST00000453522 948 ntBASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 AL138724.1-201ENST00000606771 1088 ntBASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PCDH19Q8TAB3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 AC010525.1-201ENST00000585559 441 ntBASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH19Q8TAB3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH19Q8TAB3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 AC011298.3-201ENST00000615796 283 ntBASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 AC136469.2-201ENST00000623944 1028 ntBASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH19Q8TAB3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 MIR935-201ENST00000401179 91 ntBASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDH19Q8TAB3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH19Q8TAB3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms