Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 LINC02228-203ENST00000641970 1355 ntBASIC19.38■□□□□ 0.69
CNEP1R1Q8N9A8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNEP1R1Q8N9A8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L2-201ENST00000561772 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 CCDC92B-201ENST00000575506 885 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L6-201ENST00000626483 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L1-201ENST00000627662 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L8-201ENST00000629013 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L3-201ENST00000630187 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L7-201ENST00000630678 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DUX4L5-201ENST00000630834 1275 ntBASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.36■□□□□ 0.69
CNEP1R1Q8N9A8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.35■□□□□ 0.69
CNEP1R1Q8N9A8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 KRT18P14-201ENST00000534205 1250 ntBASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 DUSP8P3-201ENST00000399571 1760 ntBASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNEP1R1Q8N9A8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.33■□□□□ 0.69
CNEP1R1Q8N9A8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 OXCT2P1-201ENST00000447263 1535 ntBASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNEP1R1Q8N9A8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms