Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SIX5Q8N196 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.44■■□□□ 1.18
SIX5Q8N196 AC068587.7-201ENST00000641602 218 ntBASIC22.44■■□□□ 1.18
SIX5Q8N196 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
SIX5Q8N196 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.43■■□□□ 1.18
SIX5Q8N196 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.43■■□□□ 1.18
SIX5Q8N196 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SIX5Q8N196 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.43■■□□□ 1.18
SIX5Q8N196 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SIX5Q8N196 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.43■■□□□ 1.18
SIX5Q8N196 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.43■■□□□ 1.18
SIX5Q8N196 AC087239.1-201ENST00000622671 572 ntBASIC22.43■■□□□ 1.18
SIX5Q8N196 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.43■■□□□ 1.18
SIX5Q8N196 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.43■■□□□ 1.18
SIX5Q8N196 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIX5Q8N196 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIX5Q8N196 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SIX5Q8N196 AC069152.1-201ENST00000438030 544 ntBASIC22.42■■□□□ 1.18
SIX5Q8N196 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.42■■□□□ 1.18
SIX5Q8N196 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SIX5Q8N196 DUX4L16-201ENST00000555130 1264 ntBASIC22.42■■□□□ 1.18
SIX5Q8N196 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.42■■□□□ 1.18
SIX5Q8N196 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.42■■□□□ 1.18
SIX5Q8N196 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.42■■□□□ 1.18
SIX5Q8N196 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SIX5Q8N196 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.42■■□□□ 1.18
SIX5Q8N196 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SIX5Q8N196 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SIX5Q8N196 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.42■■□□□ 1.18
SIX5Q8N196 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.41■■□□□ 1.18
SIX5Q8N196 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.41■■□□□ 1.18
SIX5Q8N196 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.41■■□□□ 1.18
SIX5Q8N196 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 AC010141.3-201ENST00000456659 717 ntBASIC22.41■■□□□ 1.18
SIX5Q8N196 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.41■■□□□ 1.18
SIX5Q8N196 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 AC004687.1-201ENST00000579003 1625 ntBASIC22.41■■□□□ 1.18
SIX5Q8N196 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIX5Q8N196 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 AC145676.1-201ENST00000514988 2004 ntBASIC22.4■■□□□ 1.18
SIX5Q8N196 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.4■■□□□ 1.18
SIX5Q8N196 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.4■■□□□ 1.18
SIX5Q8N196 AC104187.1-201ENST00000607510 612 ntBASIC22.4■■□□□ 1.18
SIX5Q8N196 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.4■■□□□ 1.18
SIX5Q8N196 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SIX5Q8N196 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.4■■□□□ 1.18
SIX5Q8N196 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
SIX5Q8N196 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIX5Q8N196 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.39■■□□□ 1.17
SIX5Q8N196 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
SIX5Q8N196 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.39■■□□□ 1.17
SIX5Q8N196 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.39■■□□□ 1.17
SIX5Q8N196 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.39■■□□□ 1.17
SIX5Q8N196 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.39■■□□□ 1.17
SIX5Q8N196 AC008687.6-201ENST00000596318 630 ntBASIC22.39■■□□□ 1.17
SIX5Q8N196 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.39■■□□□ 1.17
SIX5Q8N196 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIX5Q8N196 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
SIX5Q8N196 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 UBE2DNL-204ENST00000602536 740 ntBASIC22.38■■□□□ 1.17
SIX5Q8N196 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.38■■□□□ 1.17
SIX5Q8N196 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIX5Q8N196 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SIX5Q8N196 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.37■■□□□ 1.17
SIX5Q8N196 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.37■■□□□ 1.17
SIX5Q8N196 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SIX5Q8N196 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.37■■□□□ 1.17
SIX5Q8N196 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SIX5Q8N196 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SIX5Q8N196 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.37■■□□□ 1.17
SIX5Q8N196 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SIX5Q8N196 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIX5Q8N196 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.37■■□□□ 1.17
SIX5Q8N196 AC133041.1-202ENST00000642053 222 ntBASIC22.37■■□□□ 1.17
SIX5Q8N196 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIX5Q8N196 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms