Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MSRB3Q8IXL7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MSRB3Q8IXL7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.58■□□□□ 0.88
MSRB3Q8IXL7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
MSRB3Q8IXL7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MSRB3Q8IXL7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 MTDHP2-201ENST00000601468 714 ntBASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.56■□□□□ 0.88
MSRB3Q8IXL7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 Z92544.1-202ENST00000571933 1220 ntBASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 AC005229.4-201ENST00000610085 2198 ntBASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.55■□□□□ 0.88
MSRB3Q8IXL7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 AC244015.2-201ENST00000616358 1861 ntBASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 AL499627.2-201ENST00000606283 725 ntBASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 MIR4787-201ENST00000607364 84 ntBASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
MSRB3Q8IXL7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 KRT125P-201ENST00000546827 989 ntBASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MSRB3Q8IXL7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MSRB3Q8IXL7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.52■□□□□ 0.87
MSRB3Q8IXL7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSRB3Q8IXL7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms