Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC71Q8IV32 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 FBXW4P1-201ENST00000426721 2239 ntBASIC20.41■□□□□ 0.86
CCDC71Q8IV32 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 AC092053.2-201ENST00000640557 1818 ntBASIC20.41■□□□□ 0.86
CCDC71Q8IV32 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 AC080038.3-201ENST00000623346 1952 ntBASIC20.41■□□□□ 0.86
CCDC71Q8IV32 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC71Q8IV32 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 EDA-201ENST00000338901 1233 ntBASIC20.4■□□□□ 0.86
CCDC71Q8IV32 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 RARRES2P6-201ENST00000567333 442 ntBASIC20.4■□□□□ 0.86
CCDC71Q8IV32 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCDC71Q8IV32 AL355001.2-201ENST00000620617 1191 ntBASIC20.4■□□□□ 0.86
CCDC71Q8IV32 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC71Q8IV32 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC71Q8IV32 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.38■□□□□ 0.85
CCDC71Q8IV32 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC71Q8IV32 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 AF213884.3-201ENST00000563833 479 ntBASIC20.37■□□□□ 0.85
CCDC71Q8IV32 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC71Q8IV32 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms