Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 ESRRAP2-201ENST00000418437 1549 ntBASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 CROCCP5-201ENST00000436658 830 ntBASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 AC011767.1-201ENST00000617410 1153 ntBASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.63■■□□□ 1.37
NPAS4Q8IUM7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NPAS4Q8IUM7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NPAS4Q8IUM7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
NPAS4Q8IUM7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NPAS4Q8IUM7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 AL109923.1-201ENST00000618799 583 ntBASIC23.58■■□□□ 1.37
NPAS4Q8IUM7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NPAS4Q8IUM7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NPAS4Q8IUM7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
NPAS4Q8IUM7 DUSP8P3-201ENST00000399571 1760 ntBASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 AC005224.4-201ENST00000583262 1652 ntBASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 NCF1B-203ENST00000435988 1254 ntBASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 AC009237.3-201ENST00000393279 1427 ntBASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
NPAS4Q8IUM7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
NPAS4Q8IUM7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 MIR663A-201ENST00000385250 93 ntBASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 KRT87P-202ENST00000534226 1464 ntBASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NPAS4Q8IUM7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms