Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS36Q86VN1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS36Q86VN1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.46■■□□□ 1.35
VPS36Q86VN1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS36Q86VN1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS36Q86VN1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.45■■□□□ 1.34
VPS36Q86VN1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
VPS36Q86VN1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS36Q86VN1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS36Q86VN1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS36Q86VN1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS36Q86VN1 AL356441.2-201ENST00000443009 864 ntBASIC23.44■■□□□ 1.34
VPS36Q86VN1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.44■■□□□ 1.34
VPS36Q86VN1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS36Q86VN1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
VPS36Q86VN1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 AC131212.1-201ENST00000613771 668 ntBASIC23.43■■□□□ 1.34
VPS36Q86VN1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS36Q86VN1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.43■■□□□ 1.34
VPS36Q86VN1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
VPS36Q86VN1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS36Q86VN1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 MIR6724-1-201ENST00000616420 92 ntBASIC23.42■■□□□ 1.34
VPS36Q86VN1 MIR6724-2-201ENST00000616483 92 ntBASIC23.42■■□□□ 1.34
VPS36Q86VN1 MIR6724-4-201ENST00000617390 92 ntBASIC23.42■■□□□ 1.34
VPS36Q86VN1 MIR6724-3-201ENST00000622482 92 ntBASIC23.42■■□□□ 1.34
VPS36Q86VN1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS36Q86VN1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS36Q86VN1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
VPS36Q86VN1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VPS36Q86VN1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 CA15P2-201ENST00000611168 834 ntBASIC23.41■■□□□ 1.34
VPS36Q86VN1 AL117332.1-201ENST00000622628 974 ntBASIC23.41■■□□□ 1.34
VPS36Q86VN1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS36Q86VN1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VPS36Q86VN1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.4■■□□□ 1.34
VPS36Q86VN1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
VPS36Q86VN1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.4■■□□□ 1.34
VPS36Q86VN1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
VPS36Q86VN1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS36Q86VN1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms