Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRRTM1Q86UE6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 AC005703.6-201ENST00000623265 1329 ntBASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM1Q86UE6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM1Q86UE6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRTM1Q86UE6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRTM1Q86UE6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRRTM1Q86UE6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 MIR6722-201ENST00000617286 78 ntBASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM1Q86UE6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 AC004687.1-201ENST00000579003 1625 ntBASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM1Q86UE6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 AC103834.1-201ENST00000520383 144 ntBASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 AC137630.3-201ENST00000607245 391 ntBASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRRTM1Q86UE6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM1Q86UE6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms