Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL55Q7Z7F7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL55Q7Z7F7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 LINC00565-201ENST00000562710 2331 ntBASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.96□□□□□ -0.18
MRPL55Q7Z7F7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 AC092053.2-201ENST00000640557 1818 ntBASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 AL451085.2-201ENST00000605085 799 ntBASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 LINC01960-201ENST00000563759 1884 ntBASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MRPL55Q7Z7F7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 AC087742.1-201ENST00000575880 1738 ntBASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 C17orf82-201ENST00000623772 1530 ntBASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MRPL55Q7Z7F7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms