Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF111Q6ZNA4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 AC005229.4-201ENST00000610085 2198 ntBASIC21.16■□□□□ 0.98
RNF111Q6ZNA4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF111Q6ZNA4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF111Q6ZNA4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 AL356740.2-201ENST00000601559 647 ntBASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 AC131212.1-201ENST00000613771 668 ntBASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RNF111Q6ZNA4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 AL117332.1-201ENST00000622628 974 ntBASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF111Q6ZNA4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 FAM99A-202ENST00000538190 1989 ntBASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF111Q6ZNA4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF111Q6ZNA4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 MIR3621-201ENST00000580529 85 ntBASIC21.1■□□□□ 0.97
RNF111Q6ZNA4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms