Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.36■□□□□ 0.53
COL10A1Q03692 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL10A1Q03692 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL10A1Q03692 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.36■□□□□ 0.53
COL10A1Q03692 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.36■□□□□ 0.53
COL10A1Q03692 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL10A1Q03692 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.36■□□□□ 0.53
COL10A1Q03692 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL10A1Q03692 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.35■□□□□ 0.53
COL10A1Q03692 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
COL10A1Q03692 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
COL10A1Q03692 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
COL10A1Q03692 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.35■□□□□ 0.53
COL10A1Q03692 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL10A1Q03692 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL10A1Q03692 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL10A1Q03692 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.34■□□□□ 0.53
COL10A1Q03692 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 AC242852.2-201ENST00000615738 1807 ntBASIC18.34■□□□□ 0.53
COL10A1Q03692 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL10A1Q03692 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
COL10A1Q03692 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COL10A1Q03692 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
COL10A1Q03692 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
COL10A1Q03692 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
COL10A1Q03692 AC008406.3-201ENST00000620001 1374 ntBASIC18.33■□□□□ 0.53
COL10A1Q03692 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL10A1Q03692 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.33■□□□□ 0.53
COL10A1Q03692 ECEL1P1-201ENST00000373592 1742 ntBASIC18.33■□□□□ 0.52
COL10A1Q03692 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL10A1Q03692 AL138724.1-201ENST00000606771 1088 ntBASIC18.33■□□□□ 0.52
COL10A1Q03692 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL10A1Q03692 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL10A1Q03692 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL10A1Q03692 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL10A1Q03692 EP400NL-214ENST00000641289 2402 ntBASIC18.32■□□□□ 0.52
COL10A1Q03692 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.32■□□□□ 0.52
COL10A1Q03692 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
COL10A1Q03692 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.32■□□□□ 0.52
COL10A1Q03692 AC080038.3-201ENST00000623346 1952 ntBASIC18.32■□□□□ 0.52
COL10A1Q03692 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL10A1Q03692 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 MIR935-201ENST00000401179 91 ntBASIC18.32■□□□□ 0.52
COL10A1Q03692 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.32■□□□□ 0.52
COL10A1Q03692 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.32■□□□□ 0.52
COL10A1Q03692 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.32■□□□□ 0.52
COL10A1Q03692 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.32■□□□□ 0.52
COL10A1Q03692 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL10A1Q03692 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
COL10A1Q03692 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL10A1Q03692 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL10A1Q03692 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL10A1Q03692 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL10A1Q03692 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL10A1Q03692 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL10A1Q03692 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.31■□□□□ 0.52
COL10A1Q03692 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.31■□□□□ 0.52
COL10A1Q03692 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms