Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SDS3YIL084C 984 nt4.86□□□□□ -1.63
SSL2Q00578 YIL163CYIL163C 354 nt4.86□□□□□ -1.63
SSL2Q00578 RIF2YLR453C 1188 nt4.86□□□□□ -1.63
SSL2Q00578 INP1YMR204C 1263 nt4.86□□□□□ -1.63
SSL2Q00578 YBR116CYBR116C 528 nt4.86□□□□□ -1.63
SSL2Q00578 TDA11YHR159W 1515 nt4.86□□□□□ -1.63
SSL2Q00578 TGL4YKR089C 2733 nt4.85□□□□□ -1.63
SSL2Q00578 OAF1YAL051W 3144 nt4.85□□□□□ -1.63
SSL2Q00578 BBC1YJL020C 3474 nt4.85□□□□□ -1.63
SSL2Q00578 THI13YDL244W 1023 nt4.85□□□□□ -1.63
SSL2Q00578 TFB3YDR460W 966 nt4.85□□□□□ -1.63
SSL2Q00578 RSM27YGR215W 333 nt4.85□□□□□ -1.63
SSL2Q00578 SNL1YIL016W 480 nt4.85□□□□□ -1.63
SSL2Q00578 RFC2YJR068W 1062 nt4.85□□□□□ -1.63
SSL2Q00578 THI11YJR156C 1023 nt4.85□□□□□ -1.63
SSL2Q00578 REC102YLR329W 795 nt4.85□□□□□ -1.63
SSL2Q00578 YLR379WYLR379W 375 nt4.85□□□□□ -1.63
SSL2Q00578 YML119WYML119W 1074 nt4.85□□□□□ -1.63
SSL2Q00578 RRG9YNL213C 645 nt4.85□□□□□ -1.63
SSL2Q00578 YBL096CYBL096C 309 nt4.85□□□□□ -1.63
SSL2Q00578 PNT1YOR266W 1272 nt4.85□□□□□ -1.63
SSL2Q00578 DIM1YPL266W 957 nt4.85□□□□□ -1.63
SSL2Q00578 SPS2YDR522C 1509 nt4.85□□□□□ -1.63
SSL2Q00578 NOP58YOR310C 1536 nt4.85□□□□□ -1.63
SSL2Q00578 MSE1YOL033W 1611 nt4.85□□□□□ -1.63
SSL2Q00578 IME4YGL192W 1803 nt4.84□□□□□ -1.63
SSL2Q00578 STP4YDL048C 1473 nt4.84□□□□□ -1.63
SSL2Q00578 CBS1YDL069C 690 nt4.84□□□□□ -1.63
SSL2Q00578 YGR149WYGR149W 1299 nt4.84□□□□□ -1.63
SSL2Q00578 SOL4YGR248W 768 nt4.84□□□□□ -1.63
SSL2Q00578 UBI4YLL039C 1146 nt4.84□□□□□ -1.63
SSL2Q00578 YLR456WYLR456W 615 nt4.84□□□□□ -1.63
SSL2Q00578 GPI12YMR281W 915 nt4.84□□□□□ -1.63
SSL2Q00578 PLP2YOR281C 861 nt4.84□□□□□ -1.63
SSL2Q00578 YBR255C-AYBR255C-A 363 nt4.84□□□□□ -1.63
SSL2Q00578 PBN1YCL052C 1251 nt4.84□□□□□ -1.63
SSL2Q00578 PIM1YBL022C 3402 nt4.84□□□□□ -1.63
SSL2Q00578 FLO8YER109C 2400 nt4.84□□□□□ -1.64
SSL2Q00578 BUD8YLR353W 1812 nt4.83□□□□□ -1.64
SSL2Q00578 QRI7YDL104C 1224 nt4.83□□□□□ -1.64
SSL2Q00578 KIN28YDL108W 921 nt4.83□□□□□ -1.64
SSL2Q00578 YIL165CYIL165C 360 nt4.83□□□□□ -1.64
SSL2Q00578 MMM1YLL006W 1281 nt4.83□□□□□ -1.64
SSL2Q00578 ISA1YLL027W 753 nt4.83□□□□□ -1.64
SSL2Q00578 DUG3YNL191W 1074 nt4.83□□□□□ -1.64
SSL2Q00578 ELA1YNL230C 1140 nt4.83□□□□□ -1.64
SSL2Q00578 YOR034C-AYOR034C-A 243 nt4.83□□□□□ -1.64
SSL2Q00578 PRP28YDR243C 1767 nt4.83□□□□□ -1.64
SSL2Q00578 MET12YPL023C 1974 nt4.82□□□□□ -1.64
SSL2Q00578 YER145C-AYER145C-A 438 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)CtQ(UUG)C 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)D1tQ(UUG)D1 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)D2tQ(UUG)D2 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)D3tQ(UUG)D3 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)E1tQ(UUG)E1 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)HtQ(UUG)H 72 nt4.82□□□□□ -1.64
SSL2Q00578 tQ(UUG)LtQ(UUG)L 72 nt4.82□□□□□ -1.64
SSL2Q00578 CYC1YJR048W 330 nt4.82□□□□□ -1.64
SSL2Q00578 YAL056C-AYAL056C-A 351 nt4.82□□□□□ -1.64
SSL2Q00578 CDC42YLR229C 576 nt4.82□□□□□ -1.64
SSL2Q00578 YPL025CYPL025C 558 nt4.82□□□□□ -1.64
SSL2Q00578 RRP7YCL031C 894 nt4.82□□□□□ -1.64
SSL2Q00578 GAL11YOL051W 3246 nt4.82□□□□□ -1.64
SSL2Q00578 YPL260WYPL260W 1656 nt4.82□□□□□ -1.64
SSL2Q00578 YMR1YJR110W 2067 nt4.82□□□□□ -1.64
SSL2Q00578 YDR261C-DYDR261C-D 4815 nt4.82□□□□□ -1.64
SSL2Q00578 DNF2YDR093W 4839 nt4.81□□□□□ -1.64
SSL2Q00578 YND1YER005W 1893 nt4.81□□□□□ -1.64
SSL2Q00578 SER3YER081W 1410 nt4.81□□□□□ -1.64
SSL2Q00578 SBE2YDR351W 2595 nt4.81□□□□□ -1.64
SSL2Q00578 YTM1YOR272W 1383 nt4.81□□□□□ -1.64
SSL2Q00578 YDR261W-AYDR261W-A 1317 nt4.81□□□□□ -1.64
SSL2Q00578 DAS2YDR020C 699 nt4.81□□□□□ -1.64
SSL2Q00578 COQ4YDR204W 1008 nt4.81□□□□□ -1.64
SSL2Q00578 HTB1YDR224C 396 nt4.81□□□□□ -1.64
SSL2Q00578 RPL22BYFL034C-A 369 nt4.81□□□□□ -1.64
SSL2Q00578 RTA1YGR213C 954 nt4.81□□□□□ -1.64
SSL2Q00578 RAD27YKL113C 1149 nt4.81□□□□□ -1.64
SSL2Q00578 MRPL16YBL038W 699 nt4.81□□□□□ -1.64
SSL2Q00578 SME1YOR159C 285 nt4.81□□□□□ -1.64
SSL2Q00578 IRC13YOR235W 315 nt4.81□□□□□ -1.64
SSL2Q00578 GAS4YOL132W 1416 nt4.8□□□□□ -1.64
SSL2Q00578 JHD2YJR119C 2187 nt4.8□□□□□ -1.64
SSL2Q00578 NRG1YDR043C 696 nt4.8□□□□□ -1.64
SSL2Q00578 CTH1YDR151C 978 nt4.8□□□□□ -1.64
SSL2Q00578 DAM1YGR113W 1032 nt4.8□□□□□ -1.64
SSL2Q00578 PRE9YGR135W 777 nt4.8□□□□□ -1.64
SSL2Q00578 YHL034W-AYHL034W-A 462 nt4.8□□□□□ -1.64
SSL2Q00578 GAT3YLR013W 426 nt4.8□□□□□ -1.64
SSL2Q00578 SRT1YMR101C 1032 nt4.8□□□□□ -1.64
SSL2Q00578 YOR032W-AYOR032W-A 201 nt4.8□□□□□ -1.64
SSL2Q00578 TYE7YOR344C 876 nt4.8□□□□□ -1.64
SSL2Q00578 snR44snR44 211 nt4.8□□□□□ -1.64
SSL2Q00578 PTA1YAL043C 2358 nt4.8□□□□□ -1.64
SSL2Q00578 PRM1YNL279W 1986 nt4.8□□□□□ -1.64
SSL2Q00578 CTF13YMR094W 1437 nt4.8□□□□□ -1.64
SSL2Q00578 KEX1YGL203C 2190 nt4.8□□□□□ -1.64
SSL2Q00578 SUL2YLR092W 2682 nt4.79□□□□□ -1.64
SSL2Q00578 TIF4632YGL049C 2745 nt4.79□□□□□ -1.64
SSL2Q00578 SKG6YHR149C 2205 nt4.79□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms