Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.1■□□□□ 0.17
PRKDCP78527 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.1■□□□□ 0.17
PRKDCP78527 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRKDCP78527 MIPEPP3-201ENST00000412105 444 ntBASIC16.1■□□□□ 0.17
PRKDCP78527 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.1■□□□□ 0.17
PRKDCP78527 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.1■□□□□ 0.17
PRKDCP78527 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.09■□□□□ 0.17
PRKDCP78527 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 MYCNOS-205ENST00000641950 531 ntBASIC16.09■□□□□ 0.17
PRKDCP78527 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.09■□□□□ 0.17
PRKDCP78527 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PRKDCP78527 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRKDCP78527 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRKDCP78527 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PRKDCP78527 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRKDCP78527 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRKDCP78527 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.08■□□□□ 0.17
PRKDCP78527 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.08■□□□□ 0.17
PRKDCP78527 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.08■□□□□ 0.17
PRKDCP78527 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.08■□□□□ 0.17
PRKDCP78527 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.08■□□□□ 0.16
PRKDCP78527 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRKDCP78527 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRKDCP78527 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKDCP78527 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRKDCP78527 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.08■□□□□ 0.16
PRKDCP78527 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRKDCP78527 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.07■□□□□ 0.16
PRKDCP78527 UNC93B5-201ENST00000530315 699 ntBASIC16.07■□□□□ 0.16
PRKDCP78527 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKDCP78527 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PRKDCP78527 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKDCP78527 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKDCP78527 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.07■□□□□ 0.16
PRKDCP78527 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKDCP78527 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKDCP78527 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKDCP78527 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKDCP78527 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKDCP78527 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.07■□□□□ 0.16
PRKDCP78527 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKDCP78527 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKDCP78527 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRKDCP78527 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.06■□□□□ 0.16
PRKDCP78527 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 AC012306.2-201ENST00000609350 630 ntBASIC16.06■□□□□ 0.16
PRKDCP78527 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKDCP78527 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKDCP78527 AC093787.1-201ENST00000450396 207 ntBASIC16.06■□□□□ 0.16
PRKDCP78527 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PRKDCP78527 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKDCP78527 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKDCP78527 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKDCP78527 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.06■□□□□ 0.16
PRKDCP78527 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKDCP78527 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRKDCP78527 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKDCP78527 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKDCP78527 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 Z99916.2-201ENST00000604037 246 ntBASIC16.05■□□□□ 0.16
PRKDCP78527 MIR6089-201ENST00000616698 64 ntBASIC16.05■□□□□ 0.16
PRKDCP78527 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKDCP78527 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.05■□□□□ 0.16
PRKDCP78527 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRKDCP78527 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PRKDCP78527 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKDCP78527 AC068338.2-201ENST00000563278 1430 ntBASIC16.05■□□□□ 0.16
PRKDCP78527 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms