Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TAF6-204ENST00000431404 321 ntTSL 512.97□□□□□ -0.333e-6■■■■□ 21.7
NCBP2P52298 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.333e-6■■■■□ 21.7
NCBP2P52298 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.96□□□□□ -0.333e-6■■■■□ 21.7
NCBP2P52298 EHMT1-220ENST00000626216 558 ntTSL 312.88□□□□□ -0.353e-6■■■■□ 21.7
NCBP2P52298 CES2-207ENST00000566182 891 ntTSL 312.83□□□□□ -0.363e-6■■■■□ 21.7
NCBP2P52298 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.363e-6■■■■□ 21.7
NCBP2P52298 TRAF2-203ENST00000419057 709 ntTSL 312.5□□□□□ -0.413e-6■■■■□ 21.7
NCBP2P52298 PFKFB4-211ENST00000471890 553 ntTSL 412.47□□□□□ -0.413e-6■■■■□ 21.7
NCBP2P52298 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.433e-6■■■■□ 21.7
NCBP2P52298 TRAF2-204ENST00000429509 823 ntTSL 312□□□□□ -0.493e-6■■■■□ 21.7
NCBP2P52298 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC11.91□□□□□ -0.53e-6■■■■□ 21.7
NCBP2P52298 WAC-204ENST00000375646 2176 ntTSL 5 BASIC11.85□□□□□ -0.513e-6■■■■□ 21.7
NCBP2P52298 BAIAP2-222ENST00000575841 509 ntTSL 211.76□□□□□ -0.533e-6■■■■□ 21.7
NCBP2P52298 RIDA-206ENST00000522791 884 ntTSL 211.43□□□□□ -0.583e-6■■■■□ 21.7
NCBP2P52298 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC11.34□□□□□ -0.593e-6■■■■□ 21.7
NCBP2P52298 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.613e-6■■■■□ 21.7
NCBP2P52298 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.623e-6■■■■□ 21.7
NCBP2P52298 TAF6-210ENST00000452438 563 ntTSL 411.17□□□□□ -0.623e-6■■■■□ 21.7
NCBP2P52298 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.623e-6■■■■□ 21.7
NCBP2P52298 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.15□□□□□ -0.623e-6■■■■□ 21.7
NCBP2P52298 EHMT1-228ENST00000636027 3114 ntTSL 511.13□□□□□ -0.633e-6■■■■□ 21.7
NCBP2P52298 CES2-211ENST00000568470 3391 ntTSL 211.07□□□□□ -0.643e-6■■■■□ 21.7
NCBP2P52298 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC11.04□□□□□ -0.643e-6■■■■□ 21.7
NCBP2P52298 SH3BP2-224ENST00000513020 868 ntTSL 311□□□□□ -0.653e-6■■■■□ 21.7
NCBP2P52298 PRKCZ-207ENST00000466651 425 ntTSL 510.87□□□□□ -0.673e-6■■■■□ 21.7
NCBP2P52298 EHMT1-215ENST00000492232 710 ntTSL 310.59□□□□□ -0.713e-6■■■■□ 21.7
NCBP2P52298 GUSBP1-201ENST00000449061 758 ntBASIC10.53□□□□□ -0.723e-6■■■■□ 21.7
NCBP2P52298 CES2-201ENST00000317091 3927 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.743e-6■■■■□ 21.7
NCBP2P52298 FGFR1OP2-202ENST00000327214 2790 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.753e-6■■■■□ 21.7
NCBP2P52298 PCID2-216ENST00000622406 1937 ntTSL 5 BASIC10.29□□□□□ -0.763e-6■■■■□ 21.7
NCBP2P52298 RIDA-205ENST00000521560 761 ntTSL 210.28□□□□□ -0.763e-6■■■■□ 21.7
NCBP2P52298 GAS8-216ENST00000568664 341 ntTSL 510.24□□□□□ -0.773e-6■■■■□ 21.7
NCBP2P52298 GAS8-214ENST00000566266 3174 ntTSL 1 (best)10.14□□□□□ -0.793e-6■■■■□ 21.7
NCBP2P52298 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.793e-6■■■■□ 21.7
NCBP2P52298 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC10.09□□□□□ -0.793e-6■■■■□ 21.7
NCBP2P52298 TAF6-207ENST00000449571 612 ntTSL 510.04□□□□□ -0.83e-6■■■■□ 21.7
NCBP2P52298 EHMT1-222ENST00000629417 882 ntTSL 39.96□□□□□ -0.823e-6■■■■□ 21.7
NCBP2P52298 SIN3A-214ENST00000570115 554 ntTSL 49.94□□□□□ -0.823e-6■■■■□ 21.7
NCBP2P52298 PCID2-201ENST00000246505 1786 ntTSL 2 BASIC9.87□□□□□ -0.833e-6■■■■□ 21.7
NCBP2P52298 EHMT1-237ENST00000637261 4208 ntTSL 59.58□□□□□ -0.883e-6■■■■□ 21.7
NCBP2P52298 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.883e-6■■■■□ 21.7
NCBP2P52298 PFKFB4-214ENST00000490404 849 ntTSL 39.35□□□□□ -0.913e-6■■■■□ 21.7
NCBP2P52298 SIN3A-205ENST00000564778 617 ntTSL 29.23□□□□□ -0.933e-6■■■■□ 21.7
NCBP2P52298 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-6■■■■□ 21.7
NCBP2P52298 NEMP1-203ENST00000553654 458 ntTSL 59.15□□□□□ -0.943e-6■■■■□ 21.7
NCBP2P52298 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.96□□□□□ -0.973e-6■■■■□ 21.7
NCBP2P52298 GAS8-205ENST00000561675 486 ntTSL 38.54□□□□□ -1.043e-6■■■■□ 21.7
NCBP2P52298 PCID2-213ENST00000484641 800 ntTSL 58.17□□□□□ -1.13e-6■■■■□ 21.7
NCBP2P52298 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.12□□□□□ -1.113e-6■■■■□ 21.7
NCBP2P52298 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC8.03□□□□□ -1.123e-6■■■■□ 21.7
NCBP2P52298 GAS8-207ENST00000564392 479 ntTSL 37.74□□□□□ -1.173e-6■■■■□ 21.7
NCBP2P52298 SIN3A-209ENST00000568190 567 ntTSL 47.69□□□□□ -1.183e-6■■■■□ 21.7
NCBP2P52298 SPATA24-202ENST00000450845 659 ntAPPRIS P1 TSL 1 (best)7.64□□□□□ -1.193e-6■■■■□ 21.7
NCBP2P52298 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.213e-6■■■■□ 21.7
NCBP2P52298 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC7.45□□□□□ -1.223e-6■■■■□ 21.7
NCBP2P52298 PCID2-214ENST00000491548 654 ntTSL 27.37□□□□□ -1.233e-6■■■■□ 21.7
NCBP2P52298 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.78□□□□□ -1.323e-6■■■■□ 21.7
NCBP2P52298 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.72□□□□□ -1.333e-6■■■■□ 21.7
NCBP2P52298 SIN3A-210ENST00000568309 549 ntTSL 46.65□□□□□ -1.343e-6■■■■□ 21.7
NCBP2P52298 AEBP2-206ENST00000538425 518 ntAPPRIS ALT2 TSL 46.56□□□□□ -1.363e-6■■■■□ 21.7
NCBP2P52298 SIN3A-211ENST00000568431 565 ntTSL 56.55□□□□□ -1.363e-6■■■■□ 21.7
NCBP2P52298 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.371e-11■■■■□ 21.7
NCBP2P52298 CPQ-204ENST00000519900 566 ntTSL 46.43□□□□□ -1.383e-6■■■■□ 21.7
NCBP2P52298 CPQ-202ENST00000517742 660 ntTSL 56.26□□□□□ -1.413e-6■■■■□ 21.7
NCBP2P52298 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.483e-6■■■■□ 21.7
NCBP2P52298 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.83□□□□□ -1.483e-6■■■■□ 21.7
NCBP2P52298 PFKFB4-210ENST00000468162 576 ntTSL 55.7□□□□□ -1.53e-6■■■■□ 21.7
NCBP2P52298 RPL32-207ENST00000452606 631 ntTSL 25.49□□□□□ -1.533e-6■■■■□ 21.7
NCBP2P52298 RIDA-204ENST00000520507 848 ntTSL 35.21□□□□□ -1.583e-6■■■■□ 21.7
NCBP2P52298 RIDA-202ENST00000519155 271 ntTSL 35.2□□□□□ -1.583e-6■■■■□ 21.7
NCBP2P52298 RPL32-208ENST00000457131 555 ntTSL 25.02□□□□□ -1.613e-6■■■■□ 21.7
NCBP2P52298 SPATA24-207ENST00000514983 451 ntTSL 54.94□□□□□ -1.623e-6■■■■□ 21.7
NCBP2P52298 PCID2-211ENST00000475433 776 ntTSL 54.68□□□□□ -1.663e-6■■■■□ 21.7
NCBP2P52298 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)4.46□□□□□ -1.693e-6■■■■□ 21.7
NCBP2P52298 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.783e-6■■■■□ 21.7
NCBP2P52298 PFDN4-202ENST00000441080 579 ntTSL 52.95□□□□□ -1.943e-6■■■■□ 21.7
NCBP2P52298 PCID2-212ENST00000480971 701 ntTSL 52.67□□□□□ -1.983e-6■■■■□ 21.7
NCBP2P52298 ASXL1-205ENST00000497249 296 ntTSL 52.27□□□□□ -2.053e-6■■■■□ 21.7
NCBP2P52298 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.33e-6■■■■□ 21.7
NCBP2P52298 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.443e-8■■■■□ 21.7
NCBP2P52298 CASD1-204ENST00000447923 532 ntTSL 42.7□□□□□ -1.983e-8■■■■□ 21.7
NCBP2P52298 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.85■□□□□ 0.774e-17■■■■□ 21.7
NCBP2P52298 PRMT1-204ENST00000525616 780 ntTSL 219.19■□□□□ 0.664e-17■■■■□ 21.7
NCBP2P52298 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.414e-17■■■■□ 21.7
NCBP2P52298 PRMT1-220ENST00000534676 915 ntTSL 217.24■□□□□ 0.354e-17■■■■□ 21.7
NCBP2P52298 PRMT1-218ENST00000534280 766 ntTSL 316.69■□□□□ 0.264e-17■■■■□ 21.7
NCBP2P52298 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.07■□□□□ 0.164e-17■■■■□ 21.7
NCBP2P52298 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.21■□□□□ 0.034e-17■■■■□ 21.7
NCBP2P52298 PRMT1-203ENST00000524771 713 ntTSL 315.08■□□□□ 04e-17■■■■□ 21.7
NCBP2P52298 PRMT1-219ENST00000534465 779 ntTSL 311.89□□□□□ -0.514e-17■■■■□ 21.7
NCBP2P52298 PRMT1-207ENST00000527382 699 ntTSL 311.89□□□□□ -0.514e-17■■■■□ 21.7
NCBP2P52298 PRMT1-211ENST00000528623 543 ntTSL 311.53□□□□□ -0.564e-17■■■■□ 21.7
NCBP2P52298 PRMT1-212ENST00000529284 1182 ntTSL 510.65□□□□□ -0.74e-17■■■■□ 21.7
NCBP2P52298 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.091e-35■■■■□ 21.7
NCBP2P52298 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.21e-35■■■■□ 21.7
NCBP2P52298 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.261e-35■■■■□ 21.7
NCBP2P52298 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.19e-7■■■■□ 21.6
NCBP2P52298 CCDC183-204ENST00000479371 1786 ntTSL 1 (best)14.82□□□□□ -0.049e-7■■■■□ 21.6
NCBP2P52298 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.549e-9■■■■□ 21.6
NCBP2P52298 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.199e-9■■■■□ 21.6
Retrieved 100 of 18,329 protein–RNA pairs in 267.6 ms