Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF144AP50876 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNF144AP50876 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF144AP50876 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF144AP50876 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 SERBP1P1-201ENST00000396021 1160 ntBASIC20.23■□□□□ 0.83
RNF144AP50876 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.23■□□□□ 0.83
RNF144AP50876 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF144AP50876 AL499627.2-201ENST00000606283 725 ntBASIC20.23■□□□□ 0.83
RNF144AP50876 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF144AP50876 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF144AP50876 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF144AP50876 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RNF144AP50876 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF144AP50876 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RNF144AP50876 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF144AP50876 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RNF144AP50876 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF144AP50876 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF144AP50876 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
RNF144AP50876 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RNF144AP50876 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF144AP50876 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF144AP50876 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 ECEL1P1-201ENST00000373592 1742 ntBASIC20.21■□□□□ 0.83
RNF144AP50876 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF144AP50876 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF144AP50876 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF144AP50876 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF144AP50876 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RNF144AP50876 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF144AP50876 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF144AP50876 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF144AP50876 AC010525.1-201ENST00000585559 441 ntBASIC20.2■□□□□ 0.82
RNF144AP50876 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF144AP50876 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 AC008406.3-201ENST00000620001 1374 ntBASIC20.2■□□□□ 0.82
RNF144AP50876 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF144AP50876 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 AC137767.1-201ENST00000602918 1920 ntBASIC20.19■□□□□ 0.82
RNF144AP50876 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF144AP50876 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RNF144AP50876 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
RNF144AP50876 SYT6-210ENST00000641643 1587 ntBASIC20.19■□□□□ 0.82
RNF144AP50876 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF144AP50876 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF144AP50876 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF144AP50876 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF144AP50876 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF144AP50876 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF144AP50876 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RNF144AP50876 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF144AP50876 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF144AP50876 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RNF144AP50876 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF144AP50876 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF144AP50876 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms