Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX2P50458 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX2P50458 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX2P50458 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.57■□□□□ 0.72
LHX2P50458 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
LHX2P50458 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LHX2P50458 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LHX2P50458 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LHX2P50458 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX2P50458 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.56■□□□□ 0.72
LHX2P50458 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LHX2P50458 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.56■□□□□ 0.72
LHX2P50458 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.56■□□□□ 0.72
LHX2P50458 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LHX2P50458 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LHX2P50458 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LHX2P50458 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.55■□□□□ 0.72
LHX2P50458 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LHX2P50458 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LHX2P50458 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.55■□□□□ 0.72
LHX2P50458 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LHX2P50458 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LHX2P50458 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.55■□□□□ 0.72
LHX2P50458 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.55■□□□□ 0.72
LHX2P50458 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.55■□□□□ 0.72
LHX2P50458 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LHX2P50458 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LHX2P50458 AC034268.1-201ENST00000441047 882 ntBASIC19.54■□□□□ 0.72
LHX2P50458 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX2P50458 LINC02228-203ENST00000641970 1355 ntBASIC19.54■□□□□ 0.72
LHX2P50458 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
LHX2P50458 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.54■□□□□ 0.72
LHX2P50458 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LHX2P50458 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LHX2P50458 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX2P50458 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX2P50458 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LHX2P50458 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX2P50458 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LHX2P50458 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.53■□□□□ 0.72
LHX2P50458 AL162430.1-201ENST00000480705 870 ntBASIC19.53■□□□□ 0.72
LHX2P50458 CCDC92B-201ENST00000575506 885 ntBASIC19.53■□□□□ 0.72
LHX2P50458 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.53■□□□□ 0.72
LHX2P50458 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.53■□□□□ 0.72
LHX2P50458 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LHX2P50458 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LHX2P50458 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.52■□□□□ 0.72
LHX2P50458 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LHX2P50458 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX2P50458 BX005040.4-201ENST00000637145 1518 ntBASIC19.52■□□□□ 0.72
LHX2P50458 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.52■□□□□ 0.72
LHX2P50458 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
LHX2P50458 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX2P50458 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.52■□□□□ 0.72
LHX2P50458 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L2-201ENST00000561772 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 TERF1P2-201ENST00000583350 1212 ntBASIC19.52■□□□□ 0.72
LHX2P50458 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LHX2P50458 TPRG1LP1-201ENST00000598702 760 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L6-201ENST00000626483 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L1-201ENST00000627662 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L8-201ENST00000629013 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L3-201ENST00000630187 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L7-201ENST00000630678 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 DUX4L5-201ENST00000630834 1275 ntBASIC19.52■□□□□ 0.72
LHX2P50458 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
LHX2P50458 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX2P50458 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
LHX2P50458 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
LHX2P50458 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 AC079089.2-201ENST00000531211 1277 ntBASIC19.51■□□□□ 0.71
LHX2P50458 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.51■□□□□ 0.71
LHX2P50458 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX2P50458 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX2P50458 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LHX2P50458 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LHX2P50458 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LHX2P50458 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX2P50458 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX2P50458 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.5■□□□□ 0.71
LHX2P50458 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms