Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRIM2P49643 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRIM2P49643 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.69■□□□□ 0.9
PRIM2P49643 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRIM2P49643 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PRIM2P49643 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRIM2P49643 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
PRIM2P49643 AL024507.2-201ENST00000606070 2574 ntBASIC20.68■□□□□ 0.9
PRIM2P49643 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.68■□□□□ 0.9
PRIM2P49643 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRIM2P49643 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.68■□□□□ 0.9
PRIM2P49643 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRIM2P49643 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRIM2P49643 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
PRIM2P49643 AC087742.1-201ENST00000575880 1738 ntBASIC20.67■□□□□ 0.9
PRIM2P49643 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PRIM2P49643 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRIM2P49643 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.67■□□□□ 0.9
PRIM2P49643 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.67■□□□□ 0.9
PRIM2P49643 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRIM2P49643 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRIM2P49643 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.67■□□□□ 0.9
PRIM2P49643 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 AC139530.1-201ENST00000575312 1977 ntBASIC20.66■□□□□ 0.9
PRIM2P49643 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
PRIM2P49643 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PRIM2P49643 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.66■□□□□ 0.9
PRIM2P49643 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.66■□□□□ 0.9
PRIM2P49643 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PRIM2P49643 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.66■□□□□ 0.9
PRIM2P49643 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PRIM2P49643 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.66■□□□□ 0.9
PRIM2P49643 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRIM2P49643 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRIM2P49643 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
PRIM2P49643 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
PRIM2P49643 MIR3621-201ENST00000580529 85 ntBASIC20.65■□□□□ 0.9
PRIM2P49643 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PRIM2P49643 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRIM2P49643 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PRIM2P49643 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRIM2P49643 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRIM2P49643 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRIM2P49643 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRIM2P49643 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
PRIM2P49643 AL356441.2-201ENST00000443009 864 ntBASIC20.64■□□□□ 0.89
PRIM2P49643 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRIM2P49643 AC241377.3-202ENST00000626088 1088 ntBASIC20.64■□□□□ 0.89
PRIM2P49643 AC241585.3-202ENST00000628937 1088 ntBASIC20.64■□□□□ 0.89
PRIM2P49643 AC245100.8-202ENST00000629247 1058 ntBASIC20.64■□□□□ 0.89
PRIM2P49643 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRIM2P49643 C11orf96-202ENST00000528572 1834 ntBASIC20.64■□□□□ 0.89
PRIM2P49643 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRIM2P49643 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRIM2P49643 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
PRIM2P49643 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PRIM2P49643 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.63■□□□□ 0.89
PRIM2P49643 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.63■□□□□ 0.89
PRIM2P49643 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.63■□□□□ 0.89
PRIM2P49643 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PRIM2P49643 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRIM2P49643 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.62■□□□□ 0.89
PRIM2P49643 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRIM2P49643 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRIM2P49643 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms