Protein–RNA interactions for Protein: P40337

VHL, von Hippel-Lindau disease tumor suppressor, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VHLP40337 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 KRT18P10-201ENST00000388836 1287 ntBASIC20.71■□□□□ 0.91
VHLP40337 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.71■□□□□ 0.91
VHLP40337 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VHLP40337 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VHLP40337 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
VHLP40337 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VHLP40337 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
VHLP40337 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VHLP40337 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VHLP40337 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VHLP40337 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VHLP40337 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VHLP40337 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.7■□□□□ 0.9
VHLP40337 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
VHLP40337 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VHLP40337 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.7■□□□□ 0.9
VHLP40337 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.7■□□□□ 0.9
VHLP40337 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
VHLP40337 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VHLP40337 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VHLP40337 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VHLP40337 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VHLP40337 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VHLP40337 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VHLP40337 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VHLP40337 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.68■□□□□ 0.9
VHLP40337 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VHLP40337 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.68■□□□□ 0.9
VHLP40337 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VHLP40337 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.68■□□□□ 0.9
VHLP40337 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VHLP40337 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.68■□□□□ 0.9
VHLP40337 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VHLP40337 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VHLP40337 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.67■□□□□ 0.9
VHLP40337 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
VHLP40337 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VHLP40337 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.67■□□□□ 0.9
VHLP40337 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VHLP40337 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VHLP40337 FEM1AP1-201ENST00000431297 1995 ntBASIC20.66■□□□□ 0.9
VHLP40337 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.66■□□□□ 0.9
VHLP40337 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
VHLP40337 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
VHLP40337 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
VHLP40337 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VHLP40337 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.66■□□□□ 0.9
VHLP40337 LINC01971-201ENST00000617888 1048 ntBASIC20.66■□□□□ 0.9
VHLP40337 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.66■□□□□ 0.9
VHLP40337 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
VHLP40337 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VHLP40337 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VHLP40337 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
VHLP40337 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
VHLP40337 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VHLP40337 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VHLP40337 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VHLP40337 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VHLP40337 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.65■□□□□ 0.9
VHLP40337 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.65■□□□□ 0.9
VHLP40337 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VHLP40337 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms