Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.71■□□□□ 0.91
RPL3P39023 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.71■□□□□ 0.91
RPL3P39023 AC092171.4-201ENST00000609130 632 ntBASIC20.71■□□□□ 0.91
RPL3P39023 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.71■□□□□ 0.91
RPL3P39023 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
RPL3P39023 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPL3P39023 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.7■□□□□ 0.9
RPL3P39023 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 MIR3621-201ENST00000580529 85 ntBASIC20.7■□□□□ 0.9
RPL3P39023 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RPL3P39023 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPL3P39023 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.7■□□□□ 0.9
RPL3P39023 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
RPL3P39023 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 AC133637.1-201ENST00000624115 1537 ntBASIC20.69■□□□□ 0.9
RPL3P39023 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.69■□□□□ 0.9
RPL3P39023 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RPL3P39023 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
RPL3P39023 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPL3P39023 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RPL3P39023 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RPL3P39023 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.68■□□□□ 0.9
RPL3P39023 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.68■□□□□ 0.9
RPL3P39023 pRNA.6-201ENST00000610482 90 ntBASIC20.68■□□□□ 0.9
RPL3P39023 pRNA.5-201ENST00000612139 90 ntBASIC20.68■□□□□ 0.9
RPL3P39023 pRNA.11-201ENST00000618423 90 ntBASIC20.68■□□□□ 0.9
RPL3P39023 pRNA.13-201ENST00000619112 90 ntBASIC20.68■□□□□ 0.9
RPL3P39023 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPL3P39023 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
RPL3P39023 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RPL3P39023 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
RPL3P39023 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.67■□□□□ 0.9
RPL3P39023 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.67■□□□□ 0.9
RPL3P39023 AC068587.7-201ENST00000641602 218 ntBASIC20.67■□□□□ 0.9
RPL3P39023 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RPL3P39023 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPL3P39023 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 SRD5A1P1-201ENST00000442297 786 ntBASIC20.66■□□□□ 0.9
RPL3P39023 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RPL3P39023 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPL3P39023 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
RPL3P39023 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 AC099791.2-201ENST00000605725 427 ntBASIC20.65■□□□□ 0.9
RPL3P39023 AL031602.1-201ENST00000633169 911 ntBASIC20.65■□□□□ 0.9
RPL3P39023 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RPL3P39023 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
RPL3P39023 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
RPL3P39023 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPL3P39023 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPL3P39023 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPL3P39023 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.64■□□□□ 0.9
RPL3P39023 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPL3P39023 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms