Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.24■■□□□ 1.95
PDE6BP35913 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PDE6BP35913 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PDE6BP35913 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PDE6BP35913 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE6BP35913 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.23■■□□□ 1.95
PDE6BP35913 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PDE6BP35913 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.23■■□□□ 1.95
PDE6BP35913 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.23■■□□□ 1.95
PDE6BP35913 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.23■■□□□ 1.95
PDE6BP35913 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PDE6BP35913 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
PDE6BP35913 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.22■■□□□ 1.95
PDE6BP35913 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDE6BP35913 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
PDE6BP35913 AC005224.4-201ENST00000583262 1652 ntBASIC27.22■■□□□ 1.95
PDE6BP35913 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PDE6BP35913 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.22■■□□□ 1.95
PDE6BP35913 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.22■■□□□ 1.95
PDE6BP35913 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.22■■□□□ 1.95
PDE6BP35913 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PDE6BP35913 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.22■■□□□ 1.95
PDE6BP35913 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.22■■□□□ 1.95
PDE6BP35913 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.22■■□□□ 1.95
PDE6BP35913 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.21■■□□□ 1.95
PDE6BP35913 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.21■■□□□ 1.95
PDE6BP35913 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.21■■□□□ 1.95
PDE6BP35913 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.21■■□□□ 1.95
PDE6BP35913 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PDE6BP35913 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
PDE6BP35913 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
PDE6BP35913 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PDE6BP35913 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.2■■□□□ 1.94
PDE6BP35913 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.2■■□□□ 1.94
PDE6BP35913 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
PDE6BP35913 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.2■■□□□ 1.94
PDE6BP35913 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PDE6BP35913 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PDE6BP35913 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PDE6BP35913 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE6BP35913 AC009237.3-201ENST00000393279 1427 ntBASIC27.19■■□□□ 1.94
PDE6BP35913 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.19■■□□□ 1.94
PDE6BP35913 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.19■■□□□ 1.94
PDE6BP35913 SLC29A4P1-201ENST00000398760 971 ntBASIC27.19■■□□□ 1.94
PDE6BP35913 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC27.19■■□□□ 1.94
PDE6BP35913 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.19■■□□□ 1.94
PDE6BP35913 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.19■■□□□ 1.94
PDE6BP35913 AL138781.1-201ENST00000566567 1274 ntBASIC27.19■■□□□ 1.94
PDE6BP35913 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.19■■□□□ 1.94
PDE6BP35913 UBE2DNL-204ENST00000602536 740 ntBASIC27.19■■□□□ 1.94
PDE6BP35913 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.19■■□□□ 1.94
PDE6BP35913 AC138932.3-201ENST00000567634 1902 ntBASIC27.19■■□□□ 1.94
PDE6BP35913 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE6BP35913 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PDE6BP35913 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE6BP35913 AC142381.3-201ENST00000568208 1670 ntBASIC27.18■■□□□ 1.94
PDE6BP35913 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
PDE6BP35913 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PDE6BP35913 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE6BP35913 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.18■■□□□ 1.94
PDE6BP35913 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.18■■□□□ 1.94
PDE6BP35913 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
PDE6BP35913 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.18■■□□□ 1.94
PDE6BP35913 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.18■■□□□ 1.94
PDE6BP35913 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.18■■□□□ 1.94
PDE6BP35913 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PDE6BP35913 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PDE6BP35913 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDE6BP35913 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PDE6BP35913 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
PDE6BP35913 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.17■■□□□ 1.94
PDE6BP35913 AL353803.4-201ENST00000565882 1934 ntBASIC27.17■■□□□ 1.94
PDE6BP35913 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
PDE6BP35913 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.16■■□□□ 1.94
PDE6BP35913 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PDE6BP35913 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE6BP35913 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE6BP35913 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.16■■□□□ 1.94
PDE6BP35913 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PDE6BP35913 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.16■■□□□ 1.94
PDE6BP35913 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
PDE6BP35913 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDE6BP35913 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PDE6BP35913 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
PDE6BP35913 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
PDE6BP35913 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PDE6BP35913 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDE6BP35913 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
PDE6BP35913 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDE6BP35913 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.14■■□□□ 1.94
PDE6BP35913 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PDE6BP35913 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
PDE6BP35913 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.14■■□□□ 1.94
PDE6BP35913 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.14■■□□□ 1.94
PDE6BP35913 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms