Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CPS1P31327 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CPS1P31327 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.33■■■□□ 2.61
CPS1P31327 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC31.33■■■□□ 2.61
CPS1P31327 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CPS1P31327 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.32■■■□□ 2.6
CPS1P31327 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPS1P31327 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CPS1P31327 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.31■■■□□ 2.6
CPS1P31327 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CPS1P31327 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.3■■■□□ 2.6
CPS1P31327 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
CPS1P31327 RARRES2P4-201ENST00000514074 484 ntBASIC31.3■■■□□ 2.6
CPS1P31327 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CPS1P31327 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CPS1P31327 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CPS1P31327 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPS1P31327 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.29■■■□□ 2.6
CPS1P31327 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.29■■■□□ 2.6
CPS1P31327 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CPS1P31327 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPS1P31327 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPS1P31327 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPS1P31327 CNN2P6-201ENST00000439038 900 ntBASIC31.29■■■□□ 2.6
CPS1P31327 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CPS1P31327 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.28■■■□□ 2.6
CPS1P31327 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CPS1P31327 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.28■■■□□ 2.6
CPS1P31327 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CPS1P31327 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CPS1P31327 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CPS1P31327 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.28■■■□□ 2.6
CPS1P31327 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.28■■■□□ 2.6
CPS1P31327 AC105036.2-201ENST00000569468 176 ntBASIC31.28■■■□□ 2.6
CPS1P31327 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.28■■■□□ 2.6
CPS1P31327 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CPS1P31327 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.27■■■□□ 2.6
CPS1P31327 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CPS1P31327 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CPS1P31327 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CPS1P31327 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CPS1P31327 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CPS1P31327 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CPS1P31327 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.26■■■□□ 2.59
CPS1P31327 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CPS1P31327 MIR4758-201ENST00000577688 71 ntBASIC31.26■■■□□ 2.59
CPS1P31327 MYCNOS-205ENST00000641950 531 ntBASIC31.26■■■□□ 2.59
CPS1P31327 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CPS1P31327 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.26■■■□□ 2.59
CPS1P31327 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CPS1P31327 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 ADM-205ENST00000528544 586 ntTSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.25■■■□□ 2.59
CPS1P31327 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.25■■■□□ 2.59
CPS1P31327 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CPS1P31327 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
CPS1P31327 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CPS1P31327 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC31.24■■■□□ 2.59
CPS1P31327 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.24■■■□□ 2.59
CPS1P31327 RPS2P4-201ENST00000476944 856 ntBASIC31.24■■■□□ 2.59
CPS1P31327 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.24■■■□□ 2.59
CPS1P31327 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CPS1P31327 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.24■■■□□ 2.59
CPS1P31327 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
CPS1P31327 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CPS1P31327 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CPS1P31327 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CPS1P31327 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CPS1P31327 AC104187.1-201ENST00000607510 612 ntBASIC31.23■■■□□ 2.59
CPS1P31327 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CPS1P31327 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.22■■■□□ 2.59
CPS1P31327 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.22■■■□□ 2.59
CPS1P31327 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.22■■■□□ 2.59
CPS1P31327 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.22■■■□□ 2.59
CPS1P31327 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.22■■■□□ 2.59
CPS1P31327 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CPS1P31327 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.21■■■□□ 2.59
CPS1P31327 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CPS1P31327 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms